MouseMine: Query builder

Model browser

Browse through the classes and attributes. Click on show

links to add summary of fields to the results table or on show

links to add individual fields to the results. Use

links to constrain a value in the query.

Gene

Brief Description

Description

Length Integer

Mgi Type

Name

NCBI Gene Number

Primary Identifier

Score Double

Score Type

Secondary Identifier

Specificity

Symbol

Alleles Allele

Canonical Sequence Feature

The SequenceFeature class has subclasses - click constrain to select one

CDSs CDS

Child Features Sequence Feature

Chromosome Chromosome

Chromosome Location Location

Cross References Cross Reference

Data Sets Data Set

Downstream Intergenic Region Intergenic Region

Driver For MGI Allele To Driver Gene

Earliest Publication Publication

Exons Exon

The Exon class has subclasses - click constrain to select one

Expression GXD Expression

Flanking Regions Gene Flanking Region

Gene Segments Gene Segment

The GeneSegment class has subclasses - click constrain to select one

Genomic Clusters MGI Cluster Has Member

GO Annotation GO Annotation

Homologues Homologue

Ht Expression HT Data

Interactions Interaction

Introns Intron

Involved In Mutations MGI Mutation Involves

Located Features Location

Locations Location

Ontology Annotations Ontology Annotation

The OntologyAnnotation class has subclasses - click constrain to select one

Organism Organism

Overlapping Features Sequence Feature

Partner Sequence Feature

Pathways Pathway

Proteins Protein

Publications Publication

Regulatory Regions Regulatory Region

The RegulatoryRegion class has subclasses - click constrain to select one

Sequence Sequence

Sequence Ontology Term SO Term

Specific Sequence Feature

Strain Strain

Synonyms Synonym

Targeted By MGI Interacts With

Targets MGI Interacts With

Transcripts Transcript

The Transcript class has subclasses - click constrain to select one

Transgenic Expressors MGI Expresses Component

Upstream Intergenic Region Intergenic Region

UTRs UTR

The UTR class has subclasses - click constrain to select one

Query Overview

Gene

IN human cancer genes: a census. Nat Rev Cancer 2004

(A)

Name

Primary Identifier

Symbol

Chromosome Chromosome

Primary Identifier

Sequence Ontology Term SO Term

Name

Constraint logic:

one constraint

Fields selected for output

Columns to Display

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links to add fields to the results table.

Gene > Primary Identifier

(no description)

Gene > Symbol

(no description)

Gene > Name

(no description)

Gene > Type

(no description)

Gene > Chromosome

(no description)

web service URL

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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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Message:	---- Current page: ---- /mousemine/query.do ---- Current query: ---- <query name="" model="genomic" view="Gene.primaryIdentifier Gene.symbol Gene.name Gene.sequenceOntologyTerm.name Gene.chromosome.primaryIdentifier" longDescription=""><constraint path="Gene" op="IN" value="human cancer genes: a census. Nat Rev Cancer 2004"/></query>

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